I figured i'd do a bit of conclusion to this.. Everything is just about back to normal.
The bike is fixed and cost me so far about $1500, only thing left is a couple small blemishes here and there but im perfectly fine with it. The frame tab on the front of the bike that supports the fairing stay was bent. With the front end installed the nose fairing didn't line up with the side fairings. It was a bit bent to the right, so I took a piece of scrap 1/8" steel plate and bolted it to the stay. I then gave it a couple whacks with a heavy hammer and got it perfect. I was able to take it for a short test ride on Sunday.
Im back to work as of saturday, it's a bit painful with my shoulder but im getting by fine. My left arm is extremely weak, it's useless. After a while of working I have to rest my arm so I keep my left hand in my jacket pocket and use it as a sling, it helps relieve the pain! However, I think i'll be 100% for jet skiing in spring